CDS

Accession Number TCMCG006C47726
gbkey CDS
Protein Id XP_013734897.1
Location join(39499467..39499772,39499857..39500579)
Gene LOC106438329
GeneID 106438329
Organism Brassica napus

Protein

Length 342aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013879443.2
Definition ribosomal RNA small subunit methyltransferase [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category A
Description Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
KEGG_TC -
KEGG_Module -
KEGG_Reaction R10716        [VIEW IN KEGG]
KEGG_rclass RC00003        [VIEW IN KEGG]
RC03257        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14191        [VIEW IN KEGG]
EC 2.1.1.183        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000179        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0001708        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005759        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008170        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008649        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016433        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031167        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045165        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090069        [VIEW IN EMBL-EBI]
GO:0090070        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140102        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:2000232        [VIEW IN EMBL-EBI]
GO:2000234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGGAGGCAAGATAAGGAAGGAGAAGGCCAAGGCACCATCAAACCATTACCAAGGAGGAATCTCCTTCCACAAATCGAAAGGACAGCATATCCTCAAGAACCCTCTCCTCGTTGACTCTATCGTTCAGAAAGCAGGTATCAAGAGCACCGATGTGATCCTCGAGATCGGTCCAGGTACTGGTAACTTGACGAAGAAGCTTCTAGAAGCTGGTAAAGAAGTCATCGCTGTCGAACTCGATTCCCGTATGGTTCTCGAGCTTCAACGCCGTTTCCAAGCAACTCCTTATTCTAACCGCTTGAAGGTAATCCAAGGCGATGTGTTAAAGACGGAGCTTCCTCGGTTTGACATATGTGTGGCTAACATTCCGTATCAGATATCATCTCCTCTCACGTTCAAGCTTCTCTTCCACCCAACAAGCTTCAGGTGCGCTGTGATCATGTACCAGAGAGAGTTCGCCATGAGACTCGTTGCCCAACCTGGAGACAACCTTTACTGTCGTCTCTCAGTCAACACTCAGCTCTATGCAAGAGTCTCCCACCTCCTCAAAGTCGGCAAGAACAACTTCCGACCACCTCCGAAGGTGGATTCTTCTGTTGTTAGGATCGAACCGAGGAAGCCGCAGCCTCAGGTGAACAAGAAGGAGTGGGATGGGTTCTTAAGAGTCTGTTTCATCAGAAAGAACAAAACCTTGGGATCGATTTTCAGGCAAAAGTCTGTTCTTTTGATGCTGGAGAAGAACTTCAAGACTCTTCAGGCGGTACTAGCTTCGTTGAATGGCTCGACCCGAGAAGCTGCGGGTATGGATCTTGGTGACCAGAGCATGGGAATGGAAGATGATGACAACGAAATGGATGATGATGATGATGTGGAGATGGATGAAGGACAAGGAGGAGAGTTTAAAGAGAAGGTTATGAATGTGTTGAAGGAAGGTGGGTTCGAGGAGAAGAGGTCGTCTAAGCTATCACAACAAGAGTTTCTGTATCTTCTCTCGTTATTCAACAAGGCGGGCATTCACTTCTCGTAG
Protein:  
MAGGKIRKEKAKAPSNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKEVIAVELDSRMVLELQRRFQATPYSNRLKVIQGDVLKTELPRFDICVANIPYQISSPLTFKLLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLYARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPQPQVNKKEWDGFLRVCFIRKNKTLGSIFRQKSVLLMLEKNFKTLQAVLASLNGSTREAAGMDLGDQSMGMEDDDNEMDDDDDVEMDEGQGGEFKEKVMNVLKEGGFEEKRSSKLSQQEFLYLLSLFNKAGIHFS